, including all inherited members.
| AllocateStorage() | cmtk::GroupwiseRegistrationFunctionalBase | [virtual] |
| CongealingFunctional() | cmtk::CongealingFunctional< TXform > | |
| CreateGaussianKernels() | cmtk::CongealingFunctional< TXform > | [protected] |
| CreateTemplateGrid(const DataGrid::IndexType &dims, const UniformVolume::CoordinateVectorType &deltas) | cmtk::GroupwiseRegistrationFunctionalBase | [virtual] |
| CreateTemplateGridFromTargets(const std::vector< UniformVolume::SmartPtr > &targets, const int downsample=0) | cmtk::GroupwiseRegistrationFunctionalBase | [virtual] |
| DebugWriteImages() | cmtk::GroupwiseRegistrationFunctionalBase | |
| Evaluate() | cmtk::CongealingFunctional< TXform > | [virtual] |
| EvaluateAlongGradientAt(ParameterVectorType &v) | cmtk::Functional | [inline, virtual] |
| EvaluateAt(CoordinateVector &v) | cmtk::GroupwiseRegistrationFunctionalBase | [virtual] |
| cmtk::Functional::EvaluateAt(ParameterVectorType &v) | cmtk::Functional | [inline, virtual] |
| EvaluateProbabilisticThread(void *const args, const size_t taskIdx, const size_t taskCnt, const size_t threadIdx, const size_t threadCnt) | cmtk::CongealingFunctional< TXform > | [private, static] |
| EvaluateThread(void *const args, const size_t taskIdx, const size_t taskCnt, const size_t threadIdx, const size_t threadCnt) | cmtk::CongealingFunctional< TXform > | [private, static] |
| EvaluateWithGradient(CoordinateVector &v, CoordinateVector &g, const Types::Coordinate step=1) | cmtk::GroupwiseRegistrationFunctionalBase | [virtual] |
| cmtk::Functional::EvaluateWithGradient(ParameterVectorType &v, ParameterVectorType &g, const Types::Coordinate step=1) | cmtk::Functional | [virtual] |
| ForceZeroSumGradient(CoordinateVector &g) const | cmtk::GroupwiseRegistrationFunctionalBase | [protected, virtual] |
| GetActiveXformByIndex(const size_t idx) const | cmtk::GroupwiseRegistrationFunctionalXformTemplateBase< TXform > | [inline, virtual] |
| GetActiveXformByIndex(const size_t idx) | cmtk::GroupwiseRegistrationFunctionalXformTemplateBase< TXform > | [inline, virtual] |
| GetGenericActiveXformByIndex(const size_t idx) const | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| GetGenericActiveXformByIndex(const size_t idx) | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| GetGenericXformByIndex(const size_t idx) const | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| GetGenericXformByIndex(const size_t idx) | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| GetNumberOfTargetImages() const | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| GetOriginalTargetImage(const size_t imageIdx) | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| GetOriginalTargetImage(const size_t imageIdx) const | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| GetOriginalTargetImages(std::vector< UniformVolume::SmartPtr > &tImages) | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| GetOriginalTargetImages() | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| GetParamStep(const size_t idx, const Types::Coordinate mmStep=1) const | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| GetParamVector(CoordinateVector &v) | cmtk::GroupwiseRegistrationFunctionalBase | [virtual] |
| cmtk::Functional::GetParamVector(ParameterVectorType &) | cmtk::Functional | [inline, virtual] |
| GetReformattedImage(const UniformVolume::SmartPtr &targetGrid, const size_t idx) const | cmtk::GroupwiseRegistrationFunctionalBase | [protected, virtual] |
| GetTemplateGrid() | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| GetTemplateGrid() const | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| GetXformByIndex(const size_t idx) const | cmtk::GroupwiseRegistrationFunctionalXformTemplateBase< TXform > | [inline, virtual] |
| GetXformByIndex(const size_t idx) | cmtk::GroupwiseRegistrationFunctionalXformTemplateBase< TXform > | [inline, virtual] |
| GroupwiseRegistrationFunctionalBase() | cmtk::GroupwiseRegistrationFunctionalBase | |
| GroupwiseRegistrationFunctionalXformTemplate() | cmtk::GroupwiseRegistrationFunctionalXformTemplate< TXform > | |
| GroupwiseRegistrationFunctionalXformTemplateBase() | cmtk::GroupwiseRegistrationFunctionalXformTemplateBase< TXform > | |
| HistogramBinType typedef | cmtk::CongealingFunctional< TXform > | |
| HistogramType typedef | cmtk::CongealingFunctional< TXform > | |
| InterpolateAllImages() | cmtk::GroupwiseRegistrationFunctionalBase | [protected, virtual] |
| InterpolateImage(const size_t idx, byte *const destination) | cmtk::GroupwiseRegistrationFunctionalXformTemplate< TXform > | [protected, virtual] |
| m_ActiveImagesFrom | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_ActiveImagesTo | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_ActiveXformsFrom | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_ActiveXformsTo | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_Data | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_ForceZeroSum | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_ForceZeroSumFirstN | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_FreeAndRereadImages | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_GaussianSmoothImagesSigma | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_HistogramBins | cmtk::GroupwiseRegistrationFunctionalXformTemplateBase< TXform > | [protected] |
| m_HistogramKernel | cmtk::CongealingFunctional< TXform > | [protected] |
| m_HistogramKernelRadius | cmtk::CongealingFunctional< TXform > | [protected] |
| m_HistogramKernelRadiusMax | cmtk::GroupwiseRegistrationFunctionalXformTemplateBase< TXform > | [protected] |
| m_ImageVector | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_MaxRelativeNumberOutsidePixels | cmtk::GroupwiseRegistrationFunctionalXformTemplateBase< TXform > | [protected] |
| m_NeedsUpdateStandardDeviationByPixel | cmtk::CongealingFunctional< TXform > | [protected] |
| m_NumberOfTasks | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_NumberOfThreads | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_OriginalImageVector | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_PaddingValue | cmtk::GroupwiseRegistrationFunctionalBase | [protected, static] |
| m_ParametersPerXform | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_PrivateUserBackgroundValue | cmtk::GroupwiseRegistrationFunctionalXformTemplateBase< TXform > | [protected] |
| m_ProbabilisticSampleDensity | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_ProbabilisticSamples | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_ProbabilisticSampleUpdatesAfter | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_ProbabilisticSampleUpdatesSince | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_RepeatIntensityHistogramMatching | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_StandardDeviationByPixel | cmtk::CongealingFunctional< TXform > | [protected] |
| m_TempData | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_TemplateData | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_TemplateGrid | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_TemplateNumberOfPixels | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_TemplateNumberOfSamples | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_ThreadHistograms | cmtk::CongealingFunctional< TXform > | [protected] |
| m_UserBackgroundFlag | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_UserBackgroundValue | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_UseTemplateData | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| m_XformVector | cmtk::GroupwiseRegistrationFunctionalBase | [protected] |
| ParameterType typedef | cmtk::Functional | |
| ParameterVectorType typedef | cmtk::Functional | |
| ParamVectorDim() const | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| ReturnType typedef | cmtk::Functional | |
| Self typedef | cmtk::CongealingFunctional< TXform > | |
| SetActiveImagesFromTo(const size_t from, const size_t to) | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| SetActiveXformsFromTo(const size_t from, const size_t to) | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| SetCropImageHistograms(const bool crop=true) | cmtk::GroupwiseRegistrationFunctionalXformTemplateBase< TXform > | [inline, virtual] |
| SetForceZeroSum(const bool forceZeroSum=true) | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| SetForceZeroSumFirstN(const size_t forceZeroSumFirstN) | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| SetFreeAndRereadImages(const bool flag=true) | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| SetGaussianSmoothImagesSigma(const Types::Coordinate gaussianSmoothImagesSigma) | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| SetNumberOfHistogramBins(const size_t numberOfHistogramBins) | cmtk::CongealingFunctional< TXform > | [virtual] |
| SetParameter(const size_t param, const Types::Coordinate value) | cmtk::GroupwiseRegistrationFunctionalBase | [virtual] |
| SetParameter(const size_t xform, const size_t param, const Types::Coordinate value) | cmtk::GroupwiseRegistrationFunctionalBase | [virtual] |
| SetParamVector(CoordinateVector &v) | cmtk::GroupwiseRegistrationFunctionalBase | [virtual] |
| SetParamVector(CoordinateVector &v, const size_t xformIdx) | cmtk::GroupwiseRegistrationFunctionalBase | [virtual] |
| cmtk::Functional::SetParamVector(ParameterVectorType &) | cmtk::Functional | [inline, virtual] |
| SetProbabilisticSampleDensity(const float density) | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| SetProbabilisticSampleUpdatesAfter(const int iterations) | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| SetRepeatIntensityHistogramMatching(const bool flag=true) | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| SetTargetImages(std::vector< UniformVolume::SmartPtr > &tImages) | cmtk::GroupwiseRegistrationFunctionalBase | [virtual] |
| SetTemplateGrid(UniformVolume::SmartPtr &templateGrid, const int downsample=1, const bool useTemplateData=false) | cmtk::CongealingFunctional< TXform > | [virtual] |
| SetUserBackgroundValue(const byte value=0) | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| SetXforms(const std::vector< Xform::SmartPtr > &xformVector) | cmtk::GroupwiseRegistrationFunctionalBase | [inline] |
| SmartPtr typedef | cmtk::CongealingFunctional< TXform > | |
| Superclass typedef | cmtk::CongealingFunctional< TXform > | |
| ThreadParametersType typedef | cmtk::CongealingFunctional< TXform > | [private] |
| UnsetUserBackgroundValue() | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| UpdateProbabilisticSamples() | cmtk::GroupwiseRegistrationFunctionalBase | [protected, virtual] |
| UpdateStandardDeviationByPixel() | cmtk::CongealingFunctional< TXform > | [protected, virtual] |
| UpdateStandardDeviationByPixelThreadFunc(void *const args, const size_t taskIdx, const size_t taskCnt, const size_t, const size_t) | cmtk::CongealingFunctional< TXform > | [private, static] |
| VariableParamVectorDim() const | cmtk::GroupwiseRegistrationFunctionalBase | [inline, virtual] |
| Wiggle() | cmtk::CongealingFunctional< TXform > | [protected, virtual] |
| XformPointer typedef | cmtk::CongealingFunctional< TXform > | |
| XformType typedef | cmtk::CongealingFunctional< TXform > | |
| ~CongealingFunctional() | cmtk::CongealingFunctional< TXform > | [virtual] |
| ~Functional() | cmtk::Functional | [inline, virtual] |
| ~GroupwiseRegistrationFunctionalBase() | cmtk::GroupwiseRegistrationFunctionalBase | [virtual] |
| ~GroupwiseRegistrationFunctionalXformTemplate() | cmtk::GroupwiseRegistrationFunctionalXformTemplate< TXform > | [inline, virtual] |
| ~GroupwiseRegistrationFunctionalXformTemplateBase() | cmtk::GroupwiseRegistrationFunctionalXformTemplateBase< TXform > | [virtual] |
1.7.2
