cmtk::SplineWarpXform Member List

This is the complete list of members for cmtk::SplineWarpXform, including all inherited members.

AllocateParameterVector(const size_t numberOfParameters)	cmtk::Xform	[protected]
Apply(const Self::SpaceVectorType &v) const	cmtk::WarpXform	[inline, virtual]
ApplyInPlace(Self::SpaceVectorType &v) const	cmtk::SplineWarpXform	[inline, virtual]
ApplyInverse(const Self::SpaceVectorType &v, Self::SpaceVectorType &u, const Types::Coordinate accuracy=0.01) const	cmtk::SplineWarpXform	[virtual]
ApplyInverseInPlace(Self::SpaceVectorType &v, const Types::Coordinate accuracy=0.01) const	cmtk::SplineWarpXform	[virtual]
ApplyInverseInPlaceWithInitial(Self::SpaceVectorType &v, const Self::SpaceVectorType &initial, const Types::Coordinate accuracy=0.01) const	cmtk::SplineWarpXform	[virtual]
Clone() const	cmtk::SplineWarpXform	[inline]
CloneVirtual() const	cmtk::SplineWarpXform	[protected, virtual]
cmtkGetSetMacro(AffineXform::SmartPtr, InitialAffineXform)	cmtk::WarpXform
cmtkGetSetMacro(unsigned int, IgnoreEdge)	cmtk::WarpXform	[protected]
cmtkGetSetMacroDefault(bool, FastMode, true)	cmtk::WarpXform	[protected]
ConcatAffine(const AffineXform *affineXform)	cmtk::WarpXform
CopyParamVector(const Xform *other)	cmtk::Xform	[inline, virtual]
DeleteParameterActiveFlags()	cmtk::WarpXform
Domain	cmtk::WarpXform
dsplineX	cmtk::SplineWarpXform	[protected]
dsplineY	cmtk::SplineWarpXform	[protected]
dsplineZ	cmtk::SplineWarpXform	[protected]
FindClosestControlPoint(const Self::SpaceVectorType &v, Self::SpaceVectorType &cp) const	cmtk::SplineWarpXform	[protected]
GetDeformedControlPointPosition(Self::SpaceVectorType &, const int, const int, const int) const	cmtk::SplineWarpXform	[virtual]
GetDerivativeInverseConsistencyError(double &lower, double &upper, const Self *inverse, const UniformVolume *volume, const UniformVolume::RegionType *voi, const unsigned int idx, const Types::Coordinate step)	cmtk::WarpXform	[virtual]
GetDerivativeLandmarksMSD(double &lowerMSD, double &upperMSD, const MatchedLandmarkList *ll, const unsigned int idx, const Types::Coordinate step)	cmtk::WarpXform	[virtual]
GetGlobalScaling() const	cmtk::WarpXform	[inline, virtual]
GetGridEnergy() const	cmtk::SplineWarpXform	[virtual]
GetGridEnergy(const Types::Coordinate *cp) const	cmtk::SplineWarpXform	[virtual]
GetGridEnergy(const Self::SpaceVectorType &v) const	cmtk::SplineWarpXform	[virtual]
GetGridEnergyDerivative(double &lower, double &upper, const int param, const Types::Coordinate step) const	cmtk::SplineWarpXform	[virtual]
GetInverseConsistencyError(const WarpXform *inverse, const UniformVolume *volume, const UniformVolume::RegionType *voi=NULL) const	cmtk::SplineWarpXform	[virtual]
cmtk::WarpXform::GetInverseConsistencyError(const Self *inverse, const UniformVolume *volume, const UniformVolume::RegionType *voi=NULL) const	cmtk::WarpXform	[virtual]
GetJacobian(const Self::SpaceVectorType &v) const	cmtk::SplineWarpXform	[virtual]
GetJacobian(const Self::SpaceVectorType &v, CoordinateMatrix3x3 &J) const	cmtk::SplineWarpXform	[virtual]
GetJacobianAtControlPoint(const Types::Coordinate *cp, CoordinateMatrix3x3 &J) const	cmtk::SplineWarpXform	[virtual]
GetJacobianConstraint() const	cmtk::SplineWarpXform	[virtual]
GetJacobianConstraintDerivative(double &lower, double &upper, const int param, const UniformVolume::RegionType &, const Types::Coordinate step) const	cmtk::SplineWarpXform	[virtual]
GetJacobianConstraintDerivative(double &lower, double &upper, const int param, const Types::Coordinate step) const	cmtk::SplineWarpXform	[virtual]
GetJacobianConstraintSparse() const	cmtk::SplineWarpXform	[virtual]
GetJacobianConstraintThread(void *const args, const size_t taskIdx, const size_t taskCnt, const size_t, const size_t)	cmtk::SplineWarpXform	[protected, static]
GetJacobianDeterminant(const Self::SpaceVectorType &v) const	cmtk::SplineWarpXform	[virtual]
GetJacobianDeterminant(const int x, const int y, const int z) const	cmtk::SplineWarpXform	[virtual]
GetJacobianDeterminantRow(double *const values, const int x, const int y, const int z, const size_t numberOfPoints=1) const	cmtk::SplineWarpXform	[virtual]
GetJacobianFoldingConstraint() const	cmtk::SplineWarpXform	[virtual]
GetJacobianFoldingConstraintDerivative(double &lower, double &upper, const int param, const UniformVolume::RegionType &, const Types::Coordinate step) const	cmtk::SplineWarpXform	[virtual]
GetJacobianFoldingConstraintThread(void *const args, const size_t taskIdx, const size_t taskCnt, const size_t, const size_t)	cmtk::SplineWarpXform	[protected, static]
GetJacobianRow(CoordinateMatrix3x3 *const array, const int x, const int y, const int z, const size_t numberOfPoints) const	cmtk::SplineWarpXform	[virtual]
GetLandmarksMSD(const MatchedLandmarkList *ll) const	cmtk::Xform	[virtual]
GetMetaInfo(const std::string &key) const	cmtk::MetaInformationObject
GetNumberOfControlPoints() const	cmtk::WarpXform	[inline]
GetOriginalControlPointPosition(Self::SpaceVectorType &cp, const Types::Coordinate x, const Types::Coordinate y, const Types::Coordinate z) const	cmtk::WarpXform	[inline, virtual]
GetOriginalControlPointPositionByOffset(Self::SpaceVectorType &v, const size_t offset) const	cmtk::WarpXform	[inline, virtual]
GetParameter(const size_t idx) const	cmtk::Xform	[inline, virtual]
GetParameterActive(const size_t index) const	cmtk::WarpXform
GetParamStep(const size_t idx, const Self::SpaceVectorType &volSize, const Types::Coordinate mmStep=1) const	cmtk::SplineWarpXform	[inline, virtual]
GetParamVector(CoordinateVector &v, const size_t targetOffset=0) const	cmtk::Xform	[virtual]
GetPureDeformation(const bool includeScale=false) const	cmtk::SplineWarpXform
GetRigidityConstraint() const	cmtk::SplineWarpXform	[virtual]
GetRigidityConstraint(const DataGrid *weightMap) const	cmtk::SplineWarpXform	[virtual]
GetRigidityConstraint(const CoordinateMatrix3x3 &J) const	cmtk::SplineWarpXform	[private]
GetRigidityConstraintDerivative(double &lower, double &upper, const int param, const UniformVolume::RegionType &, const Types::Coordinate step) const	cmtk::SplineWarpXform	[virtual]
GetRigidityConstraintDerivative(double &lower, double &upper, const int param, const UniformVolume::RegionType &, const Types::Coordinate step, const DataGrid *weightMap) const	cmtk::SplineWarpXform	[virtual]
GetRigidityConstraintDerivative(double &lower, double &upper, const int param, const Types::Coordinate step) const	cmtk::SplineWarpXform	[virtual]
GetRigidityConstraintSparse() const	cmtk::SplineWarpXform	[virtual]
GetShiftedControlPointPosition(Self::SpaceVectorType &v, const int x, const int y, const int z) const	cmtk::WarpXform	[inline, virtual]
GetShiftedControlPointPositionByOffset(Self::SpaceVectorType &v, const size_t offset) const	cmtk::WarpXform	[inline, virtual]
GetTransformedGrid(Self::SpaceVectorType &v, const int idxX, const int idxY, const int idxZ) const	cmtk::SplineWarpXform
GetTransformedGridRow(const int numPoints, Self::SpaceVectorType *const v, const int idxX, const int idxY, const int idxZ) const	cmtk::SplineWarpXform
GetVolumeOfInfluence(const size_t idx, const Self::SpaceVectorType &, const Self::SpaceVectorType &, Self::SpaceVectorType &, Self::SpaceVectorType &, const int=-1) const	cmtk::SplineWarpXform	[virtual]
GlobalScaling	cmtk::WarpXform	[protected]
GridPointOffset	cmtk::SplineWarpXform	[protected]
gX	cmtk::SplineWarpXform	[protected]
gY	cmtk::SplineWarpXform	[protected]
gZ	cmtk::SplineWarpXform	[protected]
IndexType typedef	cmtk::WarpXform
InDomain(const Self::SpaceVectorType &v) const	cmtk::WarpXform	[inline, virtual]
Init(const Self::SpaceVectorType &domain, const Types::Coordinate delta, const AffineXform *initialXform=NULL, const bool exactDelta=false)	cmtk::SplineWarpXform
Init()	cmtk::SplineWarpXform	[protected]
InitControlPoints(const AffineXform *affineXform=NULL)	cmtk::SplineWarpXform
InitGrid(const FixedVector< 3, Types::Coordinate > &domain, const Self::IndexType &dims)	cmtk::WarpXform	[virtual]
InverseAffineScaling	cmtk::WarpXform	[protected]
InverseSpacing	cmtk::WarpXform	[protected]
JacobianDeterminant(const Types::Coordinate *cp) const	cmtk::SplineWarpXform
m_Dims	cmtk::WarpXform
m_MetaInformation	cmtk::MetaInformationObject	[mutable]
m_NumberOfParameters	cmtk::Xform
m_Offset	cmtk::WarpXform
m_Parameters	cmtk::Xform
m_ParameterVector	cmtk::Xform	[protected]
MakeInverse() const	cmtk::SplineWarpXform	[inline, virtual]
MetaInformationObject()	cmtk::MetaInformationObject	[inline]
MetaInformationObject(const MetaInformationObject &other)	cmtk::MetaInformationObject	[inline]
MetaKeyExists(const std::string &key) const	cmtk::MetaInformationObject	[inline]
nextI	cmtk::WarpXform	[protected]
nextIJ	cmtk::WarpXform	[protected]
nextIJK	cmtk::WarpXform	[protected]
nextIK	cmtk::WarpXform	[protected]
nextJ	cmtk::WarpXform	[protected]
nextJK	cmtk::WarpXform	[protected]
nextK	cmtk::WarpXform	[protected]
NumberOfControlPoints	cmtk::WarpXform	[protected]
ParamVectorDim() const	cmtk::Xform	[inline, virtual]
Refine()	cmtk::SplineWarpXform	[virtual]
RegisterVolume(const UniformVolume *volume)	cmtk::SplineWarpXform	[inline]
RegisterVolumeAxis(const DataGrid::IndexType::ValueType, const Types::Coordinate delta, const Types::Coordinate origin, const int, const Types::Coordinate, std::vector< int > &g, std::vector< Types::Coordinate > &spline, std::vector< Types::Coordinate > &dspline)	cmtk::SplineWarpXform	[private]
RegisterVolumePoints(const DataGrid::IndexType &, const Self::SpaceVectorType &)	cmtk::SplineWarpXform	[private]
RegisterVolumePoints(const DataGrid::IndexType &, const Self::SpaceVectorType &, const Self::SpaceVectorType &)	cmtk::SplineWarpXform	[private]
RelaxToUnfold()	cmtk::SplineWarpXform	[virtual]
ReplaceInitialAffine(const AffineXform *newAffineXform=NULL)	cmtk::WarpXform
Self typedef	cmtk::SplineWarpXform
SetMetaInfo(const std::string &key, const std::string &value)	cmtk::MetaInformationObject
SetParameter(const size_t idx, const Types::Coordinate p)	cmtk::Xform	[inline, virtual]
SetParameterActive(const size_t index, const bool active=true)	cmtk::WarpXform
SetParameterInactive(const size_t index)	cmtk::WarpXform
SetParametersActive()	cmtk::WarpXform
SetParametersActive(const UniformVolume::RegionType &roi)	cmtk::WarpXform
SetParametersActive(const int axis, const bool active=true)	cmtk::WarpXform
SetParametersActive(const char *axes)	cmtk::WarpXform
SetParamVector(CoordinateVector &v)	cmtk::Xform	[virtual]
SetParamVector(const CoordinateVector &v)	cmtk::Xform	[virtual]
SetShiftedControlPointPositionByOffset(const Self::SpaceVectorType &v, const int x, const int y, const int z) const	cmtk::WarpXform	[inline, virtual]
SetShiftedControlPointPositionByOffset(const Self::SpaceVectorType &v, const size_t offset) const	cmtk::WarpXform	[inline, virtual]
SmartConstPtr typedef	cmtk::SplineWarpXform
SmartPtr typedef	cmtk::SplineWarpXform
SpaceVectorType typedef	cmtk::Xform
Spacing	cmtk::WarpXform
SplineWarpXform()	cmtk::SplineWarpXform
SplineWarpXform(const FixedVector< 3, Types::Coordinate > &domain, const Types::Coordinate delta, const AffineXform *initialXform=NULL, const bool exactDelta=false)	cmtk::SplineWarpXform
SplineWarpXform(const FixedVector< 3, Types::Coordinate > &domain, const Self::IndexType &dims, CoordinateVector::SmartPtr &parameters, const AffineXform *initialXform=NULL)	cmtk::SplineWarpXform
SplineWarpXformUniformVolume class	cmtk::SplineWarpXform	[friend]
splineX	cmtk::SplineWarpXform	[protected]
splineY	cmtk::SplineWarpXform	[protected]
splineZ	cmtk::SplineWarpXform	[protected]
Superclass typedef	cmtk::SplineWarpXform
UnRegisterVolume()	cmtk::SplineWarpXform
Update(const bool exactDelta=false)	cmtk::SplineWarpXform	[virtual]
VariableParamVectorDim() const	cmtk::Xform	[inline, virtual]
VolumeDims	cmtk::SplineWarpXform	[protected]
WarpXform()	cmtk::WarpXform	[inline]
Xform(const Xform &other)	cmtk::Xform	[inline]
Xform()	cmtk::Xform	[inline]
~MetaInformationObject()	cmtk::MetaInformationObject	[inline, virtual]
~WarpXform()	cmtk::WarpXform	[inline, virtual]
~Xform()	cmtk::Xform	[inline, virtual]