- a -
- Abs()
: cmtk::DataTypeTraits< float >
, cmtk::DataTypeTraits< double >
, cmtk::DataTypeTraits< char >
, cmtk::DataTypeTraits< signed short >
, cmtk::DataTypeTraits< byte >
, cmtk::DataTypeTraits< unsigned short >
, cmtk::DataTypeTraits< int >
 
- ActiveDeformationModel()
: cmtk::ActiveDeformationModel< W >
 
- ActiveShapeModel()
: cmtk::ActiveShapeModel
 
- Add()
: cmtk::ImagePairSimilarityMeasureNCC
, cmtk::SearchTrace< R >
, cmtk::XformList
, cmtk::ImagePairSimilarityJointHistogram
, cmtk::ImagePairSimilarityMeasureCR
, cmtk::ImagePairSimilarityMeasureMSD
 
- AddCallback()
: cmtk::CommandLine
 
- AddEnum()
: cmtk::CommandLine
 
- AddFixedCoordinateDimension()
: cmtk::SplineWarpMultiChannelRegistrationFunctional< TMetricFunctional >
 
- AddFloatingChannel()
: cmtk::MultiChannelHistogramRegistrationFunctional< TDataType, TInterpolator, THashKeyType, NBitsPerChannel >
, cmtk::MultiChannelRegistrationFunctional< TInterpolator >
, cmtk::MultiChannelRegistrationFunctionalBase
 
- AddFloatingChannels()
: cmtk::MultiChannelRegistrationFunctionalBase
 
- AddFunctional()
: cmtk::MultiLevelOptimizer
 
- AddHistogram()
: cmtk::Histogram< T >
 
- AddHistogramColumn()
: cmtk::JointHistogram< T >
 
- AddHistogramRow()
: cmtk::JointHistogram< T >
 
- AddImage()
: cmtk::ImageXformDB
 
- AddImagePairXform()
: cmtk::ImageXformDB
 
- AddJointHistogram()
: cmtk::JointHistogram< T >
 
- AddKeyAction()
: cmtk::CommandLine
 
- AddLandmarkLists()
: cmtk::MatchedLandmarkList
 
- AddLaplacianGradientImage()
: cmtk::VolumeInjectionReconstruction
 
- AddList()
: cmtk::CommandLine
 
- AddMetric()
: cmtk::RegistrationJointHistogram< I >
, cmtk::VoxelMatchingCorrRatio< I >
, cmtk::VoxelMatchingCrossCorrelation
, cmtk::VoxelMatchingMeanSquaredDifference
 
- AddNumberDOFs()
: cmtk::AffineRegistration
, cmtk::ImagePairAffineRegistration
 
- AddNumberDOFsFinal()
: cmtk::AffineRegistration
, cmtk::ImagePairAffineRegistration
 
- AddOption()
: cmtk::CommandLine
 
- AddParameter()
: cmtk::CommandLine
 
- AddParameterVector()
: cmtk::CommandLine
 
- AddProgramInfoXML()
: cmtk::CommandLine
 
- AddReferenceChannel()
: cmtk::MultiChannelHistogramRegistrationFunctional< TDataType, TInterpolator, THashKeyType, NBitsPerChannel >
, cmtk::MultiChannelRegistrationFunctionalBase
 
- AddReferenceChannels()
: cmtk::MultiChannelRegistrationFunctionalBase
 
- AddRefinedXform()
: cmtk::ImageXformDB
 
- AddStudy()
: cmtk::StudyList
 
- AddSwitch()
: cmtk::CommandLine::EnumGroup< TDataType >
, cmtk::CommandLine
 
- AddTest()
: cmtk::TestFunctionMap
 
- AddToFront()
: cmtk::XformList
 
- AddUnique()
: cmtk::ResourceFile
 
- AddValue()
: cmtk::Accumulators::Sum< TDataType >
, cmtk::Accumulators::Avg< TDataType >
, cmtk::Accumulators::Max< TDataType >
 
- AddVector()
: cmtk::CommandLine
 
- AddWeightedSymmetricKernel()
: cmtk::Histogram< T >
 
- AddWeightedSymmetricKernelFractional()
: cmtk::Histogram< T >
 
- AddXform()
: cmtk::StudyList
 
- AdjustAspect()
: cmtk::ScalarImage
 
- AdjustAspectX()
: cmtk::ScalarImage
 
- AdjustAspectY()
: cmtk::ScalarImage
 
- AdjustDimension()
: cmtk::Vector< T >
 
- AdjustToIsotropic()
: cmtk::ScalarImage
 
- AffineMultiChannelRegistrationFunctional()
: cmtk::AffineMultiChannelRegistrationFunctional< TMultiChannelMetricFunctional >
 
- AffineRegistration()
: cmtk::AffineRegistration
 
- AffineRegistrationCommandLine()
: cmtk::AffineRegistrationCommandLine
 
- AffineXform()
: cmtk::AffineXform
 
- AffineXformUniformVolume()
: cmtk::AffineXformUniformVolume
 
- AlignCentersOfMass()
: cmtk::MakeInitialAffineTransformation
 
- AlignDirectionVectors()
: cmtk::MakeInitialAffineTransformation
 
- AlignFieldsOfView()
: cmtk::MakeInitialAffineTransformation
 
- AlignPrincipalAxes()
: cmtk::MakeInitialAffineTransformation
 
- AllAffine()
: cmtk::XformList
 
- Alloc()
: cmtk::TemplateArray< T >
, cmtk::TypedArray
, cmtk::DeviceMemoryCL
, cmtk::DeviceMemoryCUDA
 
- Allocate()
: cmtk::ActiveShapeModel
 
- AllocateParameterVector()
: cmtk::Xform
 
- AllocateReformattedFloatingChannels()
: cmtk::SplineWarpMultiChannelRegistrationFunctional< TMetricFunctional >
 
- AllocateStorage()
: cmtk::GroupwiseRegistrationFunctionalBase
 
- AllocDataArray()
: cmtk::VolumeFromSlices
, cmtk::VoxelMatchingMetric_Type< T, DT >::ImageData
 
- Apply()
: cmtk::ImageOperationMedianFilter
, cmtk::ImageOperationFlip
, cmtk::ImageOperationDistanceMap
, cmtk::ImageOperationBoundaryMap
, cmtk::ImageOperationApplyMask
, cmtk::AffineXform
, cmtk::ImageOperation
, cmtk::ImageOperationConnectedComponents
, cmtk::ImageOperationCropRegion
, cmtk::ImageOperationCropThreshold
, cmtk::ImageOperationDownsample
, cmtk::ImageOperationErodeDilate
, cmtk::ImageOperationConvertType
, cmtk::ImageOperationGaussFilter
, cmtk::Colormap
, cmtk::Xform
, cmtk::ImageOperationHistogramEqualization
, cmtk::ImageOperationMedialSkeleton
, cmtk::WarpXform
, cmtk::ImageOperationReplace
, cmtk::ImageOperationScaleToRange
, cmtk::ImageOperationSetPadding
, cmtk::ImageOperationThreshold
, cmtk::ImageOperationRevert
 
- ApplyAll()
: cmtk::ImageOperation
 
- ApplyBinaryMask()
: cmtk::ScalarImage
 
- ApplyFunction()
: cmtk::TypedArray
 
- ApplyFunctionDouble()
: cmtk::TemplateArray< T >
, cmtk::TypedArray
 
- ApplyFunctionFloat()
: cmtk::TypedArray
, cmtk::TemplateArray< T >
 
- ApplyFunctionObject()
: cmtk::TemplateArray< T >
, cmtk::TypedArray
 
- ApplyGaussFilter()
: cmtk::ScalarImage
 
- ApplyInPlace()
: cmtk::AffineXform
, cmtk::SplineWarpXform
, cmtk::XformList
, cmtk::DeformationField
, cmtk::Xform
 
- ApplyInverse()
: cmtk::Xform
, cmtk::SplineWarpXform
, cmtk::AffineXform
, cmtk::DeformationField
 
- ApplyInverseInPlace()
: cmtk::Xform
, cmtk::AffineXform
, cmtk::DeformationField
, cmtk::SplineWarpXform
 
- ApplyInverseInPlaceWithInitial()
: cmtk::SplineWarpXform
, cmtk::Xform
 
- ApplyLaplace2DFilter()
: cmtk::ScalarImage
 
- ApplyMedianFilter()
: cmtk::ScalarImage
 
- ApplyMirrorPlane()
: cmtk::DataGrid
 
- ApplyPrimitive()
: cmtk::Colormap
 
- ApplySobel2DFilter()
: cmtk::ScalarImage
 
- ApplySobelFilter()
: cmtk::ScalarImage
 
- ApplyThresholds()
: cmtk::ImageSymmetryPlaneFunctionalBase
 
- ApproxSpline()
: cmtk::CubicSpline
 
- ApproxSpline0()
: cmtk::CubicSpline
 
- ApproxSpline1()
: cmtk::CubicSpline
 
- ApproxSpline2()
: cmtk::CubicSpline
 
- ApproxSpline3()
: cmtk::CubicSpline
 
- ArcCos()
: cmtk::MathUtil
 
- ArcSin()
: cmtk::MathUtil
 
- ArcTan()
: cmtk::MathUtil
 
- ArcTan2()
: cmtk::MathUtil
 
- ArrayFilter()
: cmtk::ArrayFilter< I, O, InputDim >
 
- AssembleVolume()
: cmtk::VolumeFromStudy
 
- AtlasSegmentation()
: cmtk::AtlasSegmentation
 
- AttachToCommandLine()
: cmtk::ImagePairRegistration::ImagePreprocessor
, cmtk::VoxelRegistration::ImagePreprocessor
 
- AutoCrop()
: cmtk::DataGrid
 
- AverageVoxelVolume()
: cmtk::Volume
 
- Avg()
: cmtk::Accumulators::Avg< TDataType >